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{{Short description|Indian academic research organization}}
{{Infobox university
| name = Institute of Bioinformatics (IOB)
| nickname= IOB or IoB
| image_name =
| caption =
| motto =
| established = 2002
| type = [[Autonomous]] [[not-for-profit]] [[research organization]]
| Chairman =
| director = [[Akhilesh Pandey| Dr. Akhilesh Pandey]] (Founder and Director) <br /> [[R. Sirdeshmukh| Dr. Ravi Sirdeshmukh]] (Associate Director)
| city = [[Bengaluru, India|Bangalore]]
| state = [[Karnataka]]
| country = [[India]]
| campus = [[Urban area|Urban]]
| website = {{url|https://www.ibioinformatics.org/}}
| logo =
}}
The '''Institute of Bioinformatics''', often referred to as '''IOB''', is an [[India|Indian]] [[not-for-profit]] academic research organization based in [[Bangalore]], India. It is involved in research in the fields of [[bioinformatics]], [[multi-omics]], [[systems biology]] and [[neurological disorders]].<ref>{{Cite news|url=https://www.ibioinformatics.org/about_us.php|title=Institute of Bioinformatics}}</ref> In 2002, the institute was set up by The Genomics Research Trust and the [[Johns Hopkins University]] of [[Baltimore]], [[Maryland]].<ref>{{Cite news|url=https://timesofindia.indiatimes.com/education/news/unravelling-life/articleshow/44166752.cms|title=Unravelling life|first=Ritu|last=Rohatgi|newspaper=Times of India|date= 22 April 2003}}</ref> This organization is recognized as a 'Scientific and Industrial Research Organization' (SIRO) of the [[Department of Scientific and Industrial Research (India)| Department of Scientific and Industrial Research]], [[Government of India]].<ref name="auto1">{{Cite news|url=https://www.ibioinformatics.org/index.php|title=Institute of Bioinformatics}}</ref> Renowned Proteomicist [[Akhilesh Pandey]], Professor at Department of Laboratory Medicine and Pathology, Center for Individualized Medicine of [[Mayo Clinic]] in [[Rochester, Minnesota|Rochester]], [[Minnesota]], [[USA]] is the Founding and current Director of IOB, and eminent Proteomicist [[R. Sirdeshmukh | Ravi Sirdeshmukh]], Founder President of the 'Proteomic Society of India' is the current Associate Director of IOB.

==Databases developed by IOB==
* [[Human Protein Reference Database]] (in collaboration with the Pandey Lab, [[Johns Hopkins University]])<ref>{{Cite journal |vauthors=Peri S, etal |title=Development of human protein reference database as an initial platform for approaching systems biology in humans |journal=Genome Research |year=2003 |volume=13 |issue=10 |pages=2363–71 |doi=10.1101/gr.1680803 |pmid=14525934 |pmc=403728}}</ref><ref>{{cite journal | author = Gandhi T.K.B. | title = Analysis of the human protein interactome and comparison with yeast, worm and fly interaction datasets | journal = Nature Genetics | volume = 38| issue = 3| pages = 285–293 | doi=10.1038/ng1747 | pmid=16501559 | date=March 2006| s2cid = 1446423 |display-authors=etal}}</ref>
* [[Human Proteinpedia]]<ref>Kandasamy et al. Human Proteinpedia: a unified discovery resource for proteomics research. Nucleic Acids Research. Advance Access published on October 23, 2008, DOI 10.1093/nar/gkn701.</ref><ref>Mathivanan et al. Human Proteinpedia enables sharing of human protein data. Nat Biotechnology. 2008 Feb;26:164-7</ref><ref>Mishra et al. Human protein reference database—2006 update. Nucleic Acids Res. 2006 Jan;34(Database issue):D411-4</ref><ref>Peri et al. Development of human protein reference database as an initial platform for approaching systems biology in humans. Genome Res. 2003 Oct;13:2363-71.</ref>
* [[NetPath]]<ref name="pmid20067622">{{cite journal |last1=Kandasamy |first1=Kumaran |last2=Mohan |first2=Sujatha |last3=Raju |first3=Rajesh |last4=Keerthikumar |first4=Shivakumar |last5=Kumar |first5=Ghantasala S Sameer |last6=Venugopal |first6=Abhilash K |last7=Telikicherla |first7=Deepthi |last8=Navarro |first8=Daniel J |last9=Mathivanan |first9=Suresh |title=NetPath: a public resource of curated signal transduction pathways |journal=Genome Biology |volume=11 |issue=1 |pages=R3 |year=2010 |pmid=20067622 |pmc=2847715 |doi=10.1186/gb-2010-11-1-r3 |doi-access=free }}</ref><ref>{{cite journal |last1=Kandasamy |first1=K. |last2=Keerthikumar |first2=S. |last3=Raju |first3=R. |last4=Keshava Prasad |first4=T. S. |last5=Ramachandra |first5=Y. L. |last6=Mohan |first6=S. |last7=Pandey |first7=A. |title=PathBuilder--open source software for annotating and developing pathway resources |journal=Bioinformatics |volume=25 |issue=21 |pages=2860–2 |year=2009 |pmid=19628504 |pmc=2781757 |doi=10.1093/bioinformatics/btp453}}</ref>
* India Cancer Research Database
* Human Proteome Map
* Plasma Proteome Database
* Pancreatic Cancer Database
* Resource of Asian Primary Immunodeficiency Diseases
==Funding Agencies==
IOB receives grants and fundings from various national and international funding agencies.<ref>{{Cite news|url=https://www.ibioinformatics.org/funding.php|title=Institute of Bioinformatics (Funding)}}</ref>

===National funding agencies===
* [[Council of Scientific and Industrial Research]]
* [[University Grants Commission (India)]]
* [[Indian Council of Medical Research]]
* [[Department of Biotechnology]]
* [[Department of Science and Technology (India)]]
===International funding agencies===
* [[Human Proteome Organization]]
===Others===
* [[Wellcome Trust| Wellcome Trust/DBT India Alliance]]

==Affiliation==
IOB is affiliated with [[Manipal Academy of Higher Education]] (MAHE) for the award of [[Ph.D.]] degrees.<ref name="auto1">{{Cite news|url=https://www.ibioinformatics.org/index.php|title=Institute of Bioinformatics}}</ref>

==Achievements and global recognition==
IOB is the first research institute globally which has been successfully able to decipher a nearly complete protein map of human beings. In May 2014, the journal [[Nature (journal)| Nature]] published their volume putting this achievement of IOB with title 'The Human Proteome' in their cover.<ref>{{Cite news|url=https://www.nature.com/nature/volumes/509/issues/7502|title=Nature (Volume 509 Issue 7502, 29 May 2014)}}</ref><ref>{{Cite news|url=https://ndtv.in/video/show/news/scientists-map-the-proteins-323569|title=NDTV coverage on the Human Proteome Map}}</ref> On February 17, 2016, the [[Government of India]]'s [[Department of Science and Technology (India)| Department of Science and Technology]] (DST) released "India's Research Landscape: Output, Collaboration, and Comparative Performance - Bibliometric Studies," which included two reports. The first report, titled "India's Research Output and Collaboration (2005-14): A Bibliometric Study," was compiled by [[Thomson Reuters]], while the second report, titled "International Comparative Performance of India's Research Base (2009-14)," was independently compiled by [[Elsevier]]. According to Thomson Reuters, the paper "[[Human Protein Reference Database]]," published in 2009, was ranked second among the top 10 Publications with Indian Affiliation in the field of Biology and Biochemistry, and "A draft map of human proteome," featured on the cover of Nature in 2014, was found to be cited more than 400 times in a short period of time and was ranked sixth.<ref name="India's Research Output and Collaboration (2005-14): A Bibliometric Study (Phase II)">{{Cite web |url=https://www.ibioinformatics.org/news/Thomson_PgNo_1_222_Highlited.pdf |title=India's Research Output and Collaboration (2005-14): A Bibliometric Study (Phase II) |date=2017 |publisher=Thomson Reuters}}</ref>

==References==
{{Reflist}}

[[Category:Research organizations]]
[[Category:Organisations based in India]]

Institute of Bioinformatics, Bengaluru - Revision history

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